On 2012-10-02 00:27, McClelland, Erin wrote: > > Hi > Tried to post this earlier but it didn't seem to work - apologies if > this is a duplicate message. > > We have run into a problem setting up a new root bioassay set - we > continually get an error message similar to the following: Duplicate > entry '22-1' for key 'PRIMARY' - (see stack trace below). Initially we > did not have a reporter map imported for the new array we are using and > had some problems with that importation - not sure if that would affect > the root bioassay set as the reporters now seem to be in BASE. We are > using data output from ImaGene. We are unsure how to address this > problem and wondered if you have any suggestions.
It's difficult to say exactly what has happened here, but the error indicates some kind of duplicate position/reporter information in the raw data. This can be checked by going to the "Raw data" tab of one of the raw bioassays. Each entry in this table should have a unique "position", but possibly there are at least two with position=1. If that is the case, new raw bioassays has to be created and the raw data has to be re-imported. Make sure that the array design has imported reporters since that is required to make the positions unique. Hope this helps. /Nicklas ------------------------------------------------------------------------------ Don't let slow site performance ruin your business. Deploy New Relic APM Deploy New Relic app performance management and know exactly what is happening inside your Ruby, Python, PHP, Java, and .NET app Try New Relic at no cost today and get our sweet Data Nerd shirt too! http://p.sf.net/sfu/newrelic-dev2dev _______________________________________________ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject "unsubscribe" to basedb-users-requ...@lists.sourceforge.net
