[base] wrongly aligned spot images

2006-05-31 Thread Bob MacCallum
Doh! As I suspected... it turns out that the problem was at my end. There was one problematic (unexpectedly duplicated) hybridization in the experiment I'm uploading and it just so happened to be the first one I tried to create spot images for... The raw data and tiff image did not correspond t

[base] wrongly aligned spot images

2006-05-30 Thread Bob MacCallum
Hi, Has anyone had trouble creating the jpeg spot images from GenePix files? All the software works without complaining, but the spots all seem to be in the wrong place: not centred and they don't seem to correspond to the raw data. I've only tried this one file and I'm guessing that the problem