[base] error deleting jobs inside trashcan

files but I guess this is due to a connection to one of those jobs.. Any help will be great, thanks in advance ! Cheers, Reha --- Reha Yildirimman Max-Planck-Institute for Molecular Genetics Ihnestr. 73 14195 Berlin 0049-30-8413-1682

Re: [base] Reporter ID issue

Thanks alot, that definitely helps and saves alot of work ! Cheers, Reha Nicklas Nordborg wrote: Reha Yildirimman wrote: Hello, we are using different microarray platforms with BASE2.2 where several identical probe IDs occur, in e.g. probe #341838 in platform A and B. Is there a way

[base] export function: permission denied

Hello, everytime I try to export a tab-delimited file or xml file (from e.g. extracts, biosources or any other place) I get the following error: *** # Permission denied: Immediate execution is not allowed for this plugin. *** I gave the user I use read,write rights for all plugins inside the

[base] BASE2.2.0 installation problem

Hello, While installing a third base2.2.0 installation using the same application versions (mysql,tomcat,java) as in the previous successful installations I get the error printed below. The only difference is that the used server has less memory - with 4GB still sufficient - it is a 64bit

[base] user managment sharing items between projects

Hello, I have a problem concerning the user management / item sharing. There are 2 projects inside BASE: project A has items supposed to be accessible only by members from project A but shares read/write privileges for some items to users from project B I.e. users from project B shall be

Re: [base] user managment sharing items between projects

Hi Nicklas, many thanks for your help - the issue was the user role membership. After I removed the role membership, only shared or owned items as well as project related items were shown/accessible. Best, Reha Nicklas Nordborg wrote: Reha Yildirimman wrote: Hello, I have a problem

Re: [base] BASE2 login error

Dear Nicklas, many thanks for the fast fix ! Cheerio, Reha Nicklas Nordborg wrote: Nicklas Nordborg wrote: The error seems to be related to the Recently view items menu. For some reason the string that holds the information has become corrupt and the code is unfortunately not able to

[base] rawbioassays java.lang.NullPointerException

Hello, I recently updated our BASE system from 2.2 2.5.0 2.5.1 and now have the following problem. When I try to view rawbioassays (we currently have ~2000, view-setting is 99 assays per page) and I click on any page number the page wont be completely displayed , i.e. just until item 12

Re: [base] rawbioassays java.lang.NullPointerException

) at org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:80) at org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:684) at java.lang.Thread.run(Thread.java:595) Thanks in advance Reha Nicklas Nordborg wrote: Reha Yildirimman wrote: Hello, I recently

Re: [base] rawbioassays java.lang.NullPointerException

modifications to this file, check that you did'nt accidentaly overwite it during the upgrade. In any case, we'll try to fix the BASE code to handle this error better. /Nicklas Reha Yildirimman wrote: Didn't realize that I didn't copy the complete error message: ERROR [jsp]:253 - Servlet.service