Re: [base] basedb-users Digest, Vol 70, Issue 1

edit your Subject line so it is more specific than Re: Contents of basedb-users digest... Today's Topics: 1. Re: BASE reporter fields problem (Nicklas Nordborg) 2. BASE 3.4 has been released (Nicklas Nordborg) 3. RMAexpress (Ross Chapman) 4. Re: RMAexpress (Jari H?kkinen) 5

[base] BASE reporter fields problem

database version. The same plugins still work fine on the original BASE2 application. Can you point me to where the reporter fields are set and how I can correct the annotations in the new instance. Many thanks Ross -- Dr Ross Chapman Senior Bioinformatician MIMR-PHI Institute of Medical Research 27

[base] reseting root password

Hi all I have inherited the management of a BASE 2 solution for managing microarray data. I do not have access to the Root password, but I do have administrator rights. Am I able to reset the root password, will this have any impact on how BASE operates? Thanks for your help. Regards Ross

[base] Agilent and LIMMA in BASE

Hi I want to analyse Agilent microarrays in BASE 2.17.2 using LIMMA methods to perform background subtraction, normalisation and significance testing. Does anyone know if there is a suitable plugin available to perform these analyses? Thanks Ross -- Dr Ross Chapman Senior Bioinformatician