Re: [base] array design GTF import - not 9 columns

2014-05-27 Thread Bob MacCallum
Thanks for the quick reply Nicklas, We'll strip out the comments for now and keep on testing. cheers, Bob On Mon, May 26, 2014 at 7:37 AM, Nicklas Nordborg nicklas.nordb...@med.lu.se wrote: Thanks for testing this. It feels like it was a long time ago this was implemented and we have not

Re: [base] array design GTF import - not 9 columns

2014-05-26 Thread Nicklas Nordborg
Thanks for testing this. It feels like it was a long time ago this was implemented and we have not really started to use it yet. Anyway, you are correct that the problem is something deeper than the usual importer. To make GTF files parsable by the regular importers, there is a pre-parsing