[basex-talk] Question about baseX add "/path/to/filesystem/directory"
Hello I'm experiencing a trouble with the add "/path/to/filesystem/directory" on a large directory structure with thousands of files. The result is a strange error : > add "/data/PARTAGE/DOSSIERS EC&T/PC" "Configurations2/accelerator/current.xml" (Line 1): No text allowed before root element. And in the directory /data/PARTAGE/DOSSIERS EC&T/PC, no Configurations2 directory... I think a file is having a problem but with a thousand of files, how to know which of them ? On another directory, the add function works but finds xml files that aren't in the directory structure (find . -name "xxx" doesn't find them as basex finds !!!)... Is the "add function" fragile on a directory ? Many thanks in advance JMA
[basex-talk] Concurrency model
What is the best way to manage multiple users in a multi-threaded environment like servlets?
Re: [basex-talk] Returning text matches
On Thu, 2015-12-10 at 17:24 +0100, Christian Grün wrote: > Hi Ron, > > You can use ft:mark and ft:extract to highlights matches in a > full-text result [1]. And what happens if a full text match crosses an element boundary, e.g. a search for "blue socks" matching, He wore dark blue socks that day. could not return, He wore dark blue socks that day. (Yes, I should test it, sorry! but the docs should probably mention it. it was a big part of the XPath/XQuery Full Text design early on) Liam -- Liam R. E. Quin The World Wide Web Consortium (W3C)
Re: [basex-talk] Returning text matches
Thanks, Christian. The following works as expected (the output contains the
matches with their surrounding context)
for $study in db:open('CTGov')/clinical_study
let $result := $study contains text { 'genomics', 'genomic', 'transcriptome',
'exome', 'whole genome', 'microarray', 'proteome', 'metabolome' }
let score $score := $result
where $score >= 0.01
return ft:extract($study//*[text() contains text { 'genomics', 'genomic',
'transcriptome', 'exome', 'whole genome', 'microarray', 'proteome',
'metabolome' }])
Is it possible to combine the two patterns (i.e., the selection criteria and
the extraction in the return) into a single one?
Perhaps this is what ft:mark is supposed to do but I could not get it to work...
Best,
Ron
On December 10, 2015 at 11:24:38 AM, Christian Grün (christian.gr...@gmail.com)
wrote:
Hi Ron,
You can use ft:mark and ft:extract to highlights matches in a
full-text result [1].
Hope this helps,
Christian
[1] http://docs.basex.org/wiki/Full-Text_Module#ft:mark
On Thu, Dec 10, 2015 at 4:33 PM, Ron Katriel wrote:
> Hi,
>
> Is there a way to return all matches when searching a large XML structure?
> For example, return the genomic keywords that matched anywhere in $study
> using the following query:
>
> for $study in db:open('CTGov')/clinical_study
> let $result := $study contains text { 'genomics', 'genomic',
> 'transcriptome', 'exome', 'whole genome', 'microarray', 'proteome',
> 'metabolome' }
> let score $score := $result
> where $score >= 0.01
> return $study/id_info/nct_id (: this is just the Study ID :)
>
> Ideally it would include an indication of where in the tree the matches are
> (e.g., that ‘exome’ was found in $study/official_title and in
> $article/keywords).
>
> This could presumably be done using regular expression matching (after
> serializing the tree into a text string) but it does not seem an elegant
> solution.
>
> Thanks,
> Ron
>
Re: [basex-talk] Returning text matches
Hi Ron,
You can use ft:mark and ft:extract to highlights matches in a
full-text result [1].
Hope this helps,
Christian
[1] http://docs.basex.org/wiki/Full-Text_Module#ft:mark
On Thu, Dec 10, 2015 at 4:33 PM, Ron Katriel wrote:
> Hi,
>
> Is there a way to return all matches when searching a large XML structure?
> For example, return the genomic keywords that matched anywhere in $study
> using the following query:
>
> for $study in db:open('CTGov')/clinical_study
> let $result := $study contains text { 'genomics', 'genomic',
> 'transcriptome', 'exome', 'whole genome', 'microarray', 'proteome',
> 'metabolome' }
> let score $score := $result
> where $score >= 0.01
> return $study/id_info/nct_id (: this is just the Study ID :)
>
> Ideally it would include an indication of where in the tree the matches are
> (e.g., that ‘exome’ was found in $study/official_title and in
> $article/keywords).
>
> This could presumably be done using regular expression matching (after
> serializing the tree into a text string) but it does not seem an elegant
> solution.
>
> Thanks,
> Ron
>
[basex-talk] Returning text matches
Hi,
Is there a way to return all matches when searching a large XML structure? For
example, return the genomic keywords that matched anywhere in $study using the
following query:
for $study in db:open('CTGov')/clinical_study
let $result := $study contains text { 'genomics', 'genomic', 'transcriptome',
'exome', 'whole genome', 'microarray', 'proteome', 'metabolome' }
let score $score := $result
where $score >= 0.01
return $study/id_info/nct_id (: this is just the Study ID :)
Ideally it would include an indication of where in the tree the matches are
(e.g., that ‘exome’ was found in $study/official_title and in
$article/keywords).
This could presumably be done using regular expression matching (after
serializing the tree into a text string) but it does not seem an elegant
solution.
Thanks,
Ron
