Re: regex parsing-Beginner

2007-12-05 Thread Gunnar Hjalmarsson
minky arora wrote: There is one thing I need to figure out.The last step: So,what I need to do is,for the gene names where the difference in range is not zero,I need to report the lines at the end of the file(The sequence of strings) that contain that range. So, you keep reformulating the prob

Re: regex parsing-Beginner

2007-12-05 Thread minky arora
Hi, Thanks evryone you helped me with this problem.I have reported all parts of the file as was needed.There is one thing I need to figure out.The last step: So,what I need to do is,for the gene names where the difference in range is not zero,I need to report the lines at the end of the file(The

Re: regex parsing-Beginner

2007-12-04 Thread minky arora
Thanks PAul, That solves half my problem.I am working on it.If I need more help,I will post it up. -Min On 12/4/07, Paul Lalli <[EMAIL PROTECTED]> wrote: > On Dec 4, 11:06 am, [EMAIL PROTECTED] (Minky Arora) wrote: > > I am quite new to perl so pls bear with me.I am trying to do some > > Bioinf

Re: regex parsing-Beginner

2007-12-04 Thread Gunnar Hjalmarsson
minky arora wrote: .A part of my file looks like this: gene410..1750 /gene="dnaA" /db_xref="EMBL:2632267" CDS 410..1750 /gene="dnaA" /function="initiation of chromosome replication (D

Re: regex parsing-Beginner

2007-12-04 Thread Paul Lalli
On Dec 4, 11:06 am, [EMAIL PROTECTED] (Minky Arora) wrote: > I am quite new to perl so pls bear with me.I am trying to do some > Bioinformatics Analysis.A part of my file looks like this: > > gene410..1750 > /gene="dnaA" > /db_xref="EMBL:2632267