Re: [Bioc-devel] [GenomicFeatures] no pkgName found. makeTxDbPackage() called after txdb created from GFF3 file

2013-02-08 Thread Marc Carlson
Hi Tengfei, Yes that looks like an oversight. Thanks for reporting that! I will extend makeTxDbPackage so that it's more accommodating of these newer transcriptDbs. If you want to help me out, you could call saveDb() on your gmax189 object and send me the .sqlite file that you save it to.

Re: [Bioc-devel] [GenomicFeatures] no pkgName found. makeTxDbPackage() called after txdb created from GFF3 file

2013-02-08 Thread Cook, Malcolm
.Hi Tengfei, . .Yes that looks like an oversight. Thanks for reporting that! I will .extend makeTxDbPackage so that it's more accommodating of these newer .transcriptDbs. If you want to help me out, you could call saveDb() on .your gmax189 object and send me the .sqlite file that you save