Re: [Bioc-devel] Access check.log file after error

Thank you for all the answers and that is great to get the rest of the error output. Just to clarify, is there a way for me to retrieve myself the file /Users/biocbuild/bbs-3.3-bioc/meat/SWATH2stats.Rcheck/tests/test-all.Rout.fail on morelia (and similar on zin2) that Brian just sent me, or

Re: [Bioc-devel] Access check.log file after error

Hi Peter, Jim is right, the content of /Users/biocbuild/bbs-3.3-bioc/meat/SWATH2stats.Rcheck/00check.log is nearly identical to what you see on the web . The only difference, is that the copy on web is a day

Re: [Bioc-devel] Access check.log file after error

Sorry for the additional email. It turns out there is additional information in the file /Users/biocbuild/bbs-3.3-bioc/meat/SWATH2stats.Rcheck/tests/test-all.Rout.fail on morelia (and similar on zin2). Below are the contents of each. >From morelia R Under development (unstable) (2015-11-08

[Bioc-devel] Access check.log file after error

Dear all, I am maintaining the R package SWATH2stats and I received an error after having added a new test and committed it to the devel branch. As I cannot reproduce the error on my own computer I wanted to have a look at the error log that exists from the CHECK report on the Bioconductor

Re: [Bioc-devel] Access check.log file after error

As I already told you on the support site, everything you need to know is in the Command output (the 00check.log is the same output) found by clicking on the Error for each build machine. For Moscato, you have: Warning: replacing previous import by 'data.table::melt' when loading 'MSstats' Error

Re: [Bioc-devel] Access check.log file after error

Hi, We already display the details of RUnit-based tests (Dan added this a long time ago). See for example: http://bioconductor.org/checkResults/3.3/bioc-LATEST/GenomicFeatures/zin2-checksrc.html There is no reason to not do it for testthat-based tests too. H. On 11/11/2015 10:09 AM,