Re: [Bioc-devel] specify the color in plotMutationSpectrum() of SomaticSignatures library

Dear Rebecca can you please post this in the Bioconductor user forum - this is not really a developer question. > On Feb 17, 2016, at 20:33 GMT+1, sun wrote: > > Hi All, > > How can I specify the color that I would like to use in > plotMutationSpectrum()? > > eg. > >

Re: [Bioc-devel] Strand-Awareness for Restrict Function

On 02/18/2016 01:00 AM, Maintainer wrote: Hello, Hi, I'm putting this back to bioc-devel and setting the Subject to "Strand-Awareness for Restrict Function" since this seems to be a continuation of this thread (that you started here). I hope you don't mind. Setdiff automatically reduces

Re: [Bioc-devel] Efficient Random Sampling of Positions in GRanges

Hi, On 02/18/2016 03:00 AM, Dario Strbenac wrote: Good day, Thank you for these two suggestions. I have questions about both options. GPos seems to have a limit on the number of bases it can represent. I get an error: Error in GPos(samplingAreas) : too many genomic positions in 'pos_runs'.

Re: [Bioc-devel] Efficient Random Sampling of Positions in GRanges

Good day, Thank you for these two suggestions. I have questions about both options. GPos seems to have a limit on the number of bases it can represent. I get an error: Error in GPos(samplingAreas) : too many genomic positions in 'pos_runs'. What exactly is this limit ? Could it be added to the