Re: [Bioc-devel] package build : Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE

2016-02-28 Thread Dan Tenenbaum
- Original Message - > From: "Diana LOW" > To: "bioc-devel" > Sent: Sunday, February 28, 2016 9:25:43 PM > Subject: [Bioc-devel] package build : Warning: 'rgl_init' failed, running > with rgl.useNULL = TRUE > Hi, > > I've been

[Bioc-devel] package build : Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE

2016-02-28 Thread Diana LOW (IMCB)
Hi, I've been getting this error on package build (morelia), and it appears as a warning on the zin2 check. Warning in rgl.init(initValue, onlyNULL) : RGL: unable to open X11 display Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE I am also getting occasional errors like this

Re: [Bioc-devel] workflows running Bioc-devel

2016-02-28 Thread Aaron Lun
Hi Dan, Sounds good. In which case, I'll stick to my original plan, i.e., to submit the package for BioC 3.4. We can figure out what to do with the workflow and build system then, if it hasn't already been sorted. Cheers, Aaron Dan Tenenbaum wrote: > Hi, > > This has come up before and

Re: [Bioc-devel] workflows running Bioc-devel

2016-02-28 Thread Dan Tenenbaum
Hi, This has come up before and probably should be done at some point. I can be virtually certain that it will not happen before the upcoming (3.3) release though. Thanks. Dan - Original Message - > From: "Michael Love" > To: "Aaron Lun"

Re: [Bioc-devel] workflows running Bioc-devel

2016-02-28 Thread Michael Love
+1 I'm also interested in having the option of devel / release workflow branches for the reasons Aaron mentions. I develop software and workflow in tandem but currently there is a disconnect in showing publicly how software changes will impact a workflow. [[alternative HTML version