Re: [Bioc-devel] release schedule

2017-03-16 Thread Tyler Smith
Ok, thanks. I nearly missed the last one, and had a sudden panic this afternoon when I realised it was almost time for the next :-) Best, Tyler -- plantarum.ca On Thu, Mar 16, 2017, at 06:55 PM, Obenchain, Valerie wrote: > Hi Tyler, > > Yes, there is another release coming up. We

Re: [Bioc-devel] release schedule

2017-03-16 Thread Obenchain, Valerie
Hi Tyler, Yes, there is another release coming up. We usually release a day or two after R does so we don't set a date until R has announced theirs. As soon as we know the R schedule we'll make an announcement on bioc-devel and the support site. I'll also post the new release schedule. Valerie

[Bioc-devel] release schedule

2017-03-16 Thread Tyler Smith
Hi, Is there a deadline for for updates to packages for the next release yet? The webpage hasn't been updated since October (http://bioconductor.org/developers/release-schedule/), but I think there is another release in April? Best, Tyler -- plantarum.ca

Re: [Bioc-devel] Question on the build and biocheck of the package

2017-03-16 Thread Martin Morgan
On 03/16/2017 01:56 PM, Aayush Raman wrote: Hello Hervé Thanks for a quick reply. I have some more questions: 1. This the report of the build of package from Bioconductor: http://bioconductor.org/spb_reports/DASC_buildreport_20170306051600.html. Here, you will see *dependencies error* in the

Re: [Bioc-devel] Question on the build and biocheck of the package

2017-03-16 Thread Shepherd, Lori
Hello, 1. Please ignore the dependency ERROR on tokay2 for now. Some of this is on our end and we are in the process of correcting. 2. You have to make sure the webhook is set up for your package to automatically build on version bumps. If you have not set up the webhook, please do so

Re: [Bioc-devel] Question on the build and biocheck of the package

2017-03-16 Thread Aayush Raman
Hello Hervé Thanks for a quick reply. I have some more questions: 1. This the report of the build of package from Bioconductor: http://bioconductor.org/spb_reports/DASC_buildreport_20170306051600.html. Here, you will see *dependencies error* in the tokay2 BUILD SRC output. Should I include these

Re: [Bioc-devel] Question on the build and biocheck of the package

2017-03-16 Thread Hervé Pagès
Hi Ar, On 03/15/2017 12:57 AM, Aayush Raman wrote: Hello Everyone, I have developed a Bioconductor package and submit the issue to build and check. I have some questions regarding on the build and BioCheck of the package. Here are the questions: 1. It has passed the build and check on Mac OS

[Bioc-devel] Conference: BioC 2017: Where Software and Biology Connect, July 26 - 28, Boston MA

2017-03-16 Thread Martin Morgan
Developers! Please join us at our annual conference https://bioconductor.org/BioC2017 Consider contributing by proposing a user-oriented workshop or community-building birds-of-a-feather session; applications are on the conference web site. See you in Boston! Martin Morgan Bioconductor

[Bioc-devel] Question on the build and biocheck of the package

2017-03-16 Thread Aayush Raman
Hello Everyone, I have developed a Bioconductor package and submit the issue to build and check. I have some questions regarding on the build and BioCheck of the package. Here are the questions: 1. It has passed the build and check on Mac OS and Windows. However, when I am checking it on linux,