Re: [Bioc-devel] Vignette update after change in git mirror repo

Thanks for your help, this makes much more sense. Best, Maia On Sun, Apr 23, 2017 at 7:16 PM, Hervé Pagès wrote: > Nothing strange about this. As I said, all packages are built and > checked daily and the build report is updated every day with the new > results. But there

Re: [Bioc-devel] error related to kmp_runtime.cpp(6480)

Hi Vlad, veracruz2 uses clang 4.0.0 instead of the compilers shipped with Xcode. See: http://www.bioconductor.org/checkResults/devel/bioc-LATEST/veracruz2-NodeInfo.html About 1 month ago the CRAN folks decided to use El Capitan + clang 4.0.0 for building the R and package binaries distributed

Re: [Bioc-devel] error related to kmp_runtime.cpp(6480)

On 04/24/2017 04:43 PM, Vladislav Petyuk wrote: My package passes all the builds except OS X. http://www.bioconductor.org/checkResults/devel/bioc-LATEST/MSnID/veracruz2-buildsrc.html Interestingly, the build goes just fine (with the same arguments) on my laptop, which is OS X 10.12.3. Given

Re: [Bioc-devel] stop svn commits to BioC 3.5

The branch has been made and commits can resume. Details here: https://stat.ethz.ch/pipermail/bioc-devel/2017-April/010951.html Valerie On 04/24/2017 11:38 AM, Obenchain, Valerie wrote: > Hi, > > We are about to create the 3.5 branches for software and experimental > data. Please stop svn

Re: [Bioc-devel] 3.5 branch created in svn

On 04/24/2017 01:23 PM, Valerie Obenchain wrote: > The BioC 3.5 branch is now ready. > > Remember, you always have access to 2 versions of your package in svn: > the "release" and "devel" versions. > > Right now the "release" version of your package (which is not officially > released yet but

[Bioc-devel] error related to kmp_runtime.cpp(6480)

My package passes all the builds except OS X. http://www.bioconductor.org/checkResults/devel/bioc-LATEST/MSnID/veracruz2-buildsrc.html Interestingly, the build goes just fine (with the same arguments) on my laptop, which is OS X 10.12.3. Given that kmp_runtime.cpp is from OpenMP and chunk 25 in

[Bioc-devel] 3.5 branch created in svn

The BioC 3.5 branch is now ready. Remember, you always have access to 2 versions of your package in svn: the "release" and "devel" versions. Right now the "release" version of your package (which is not officially released yet but will be tomorrow if everything goes well) is in the 3.5 branch

[Bioc-devel] stop svn commits to BioC 3.5

Hi, We are about to create the 3.5 branches for software and experimental data. Please stop svn commits to these repos until further notice. We expect this to take about 1 hour and will post back here when commits can resume. Thanks. Valerie This email message may contain legally privileged