Hi Alper,
As you can see here
https://cran.r-project.org/web/packages/V8/
and here
https://cran.r-project.org/web/packages/ggraph/
CRAN doesn't provide OS X binaries of V8 and ggraph for r-devel yet so
our build system is unable to install these packages. Whether this is
going to be
Hi,
Two CRAN packages, V8 and ggraph are not available in merida OS X system
and I got and error.
http://bioconductor.org/checkResults/devel/bioc-LATExT/debrowser/
Is it going to be fixed or should we start thinking some other fix for the
problem?
Best,
Alper
--
Alper Kucukural, PhD
Assistant
Hi all,
Same kind of error for my TVTB package (
https://master.bioconductor.org/checkResults/3.8/bioc-LATEST/TVTB/malbec1-checksrc.html
).
I'll run R CMD check locally ASAP to see whether I need to update TVTB or
if it's something upstream.
Best,
Kevin
On Tue, Jan 8, 2019 at 5:05 PM Obenchain,
Hi Erik,
There have been a few changes to VariantAnnotation lately. I'll take a
look at seqCAT and get back to you.
Valerie
On 1/8/19 6:07 AM, Erik Fasterius wrote:
> I recently started to get a weird error when building the vignette to my
> seqCAT package, related to a VCF file I use as
On Mon, Jan 7, 2019 at 3:26 PM Henrik Bengtsson
wrote:
>
> 1. To achieve fully numerically reproducible RNGs in way that is
> *invariant to the number of workers* (amount of chunking), I think the
> only solution is to pregenerated RNG seeds (using
> parallel::nextRNGStream()) for each
I recently started to get a weird error when building the vignette to my seqCAT
package, related to a VCF file I use as example data. The error itself looks
like this:
scanVcf: _DNAencode(): invalid DNAString input character: '1' (byte value 49)
path: (...)/seqCAT/extdata/example.vcf.gz
I can
Good point Kasper, I hadn’t even considered the possibility of that. This has
opened an unpleasant box of worms...
I haven’t noticed any issues with MT, but I’ve just switched my DropletUtils
C++ code from boost::random::mt19937 to dqrng’s pcg32 to avoid potential
problems with overlaps
