Dear Bioconductor team,
I just found out that our package DeMixT 1.3.5 is failed to install for Mac
under the developed version.
Does that mean I need to rebuild the package under the official Mac build of R
4.0.0 alpha and push it again?
Thanks,
Peng
On 4/9/20, 4:13 PM, "Bioc-devel on
Thanks Michael!
I verified that building regionReport works with ggbio 1.35.2
https://github.com/tengfei/ggbio/commit/6bc94f45e6479b01287e25140821f239f1a7f92d
on linux OS and I updated the gist at
https://gist.github.com/lcolladotor/b7585962082263b377c02fa4451f27e6
with a file
Hello Bioconductor developers,
As you've probably noticed already, we're building BioC 3.11 on Mac again:
https://bioconductor.org/checkResults/3.11/bioc-LATEST/
The build target now is High Sierra (used to be El Capitan), like for
the official Mac built of R 4.0.0 alpha (available here
I bumped the version of ggbio which should propagate a recent fix.
Michael
On Thu, Apr 9, 2020 at 7:11 AM Leonardo Collado Torres <
lcollado...@gmail.com> wrote:
> Hi BioC-devel,
>
> I was able to trace a regionReport error back to ggbio & biovizBase.
> However, I'm completely clueless as to
We need more information,
http://bioconductor.org/developers/how-to/git/faq/
#13 and #14 in the FAQ are relevant to you.
Nitesh
> On Apr 9, 2020, at 12:39 PM, Tiago Lubiana Alves
> wrote:
>
> Hello all,
>
> I have recently made a few change to a package that I mantain, but I seem
> to be
On 4/7/20 06:15, Kasper Daniel Hansen wrote:
Thanks for the two pointers.
Herve: we are using a number of unexpected functions from HDF5Array:
‘HDF5Array:::.create_dir’, ‘HDF5Array:::.replace_dir’,
‘HDF5Array:::.shorten_assay2h5_links’
tss tss... naughty!
That might be relevant in light
Hello all,
I have recently made a few change to a package that I mantain, but I seem
to be currently unable to update the fcoex package.
Even though I am the maintainer (
http://bioconductor.org/packages/3.11/bioc/html/fcoex.html) I do not have
access to it according to BiocCredentials:
Hi BioC-devel,
I was able to trace a regionReport error back to ggbio & biovizBase.
However, I'm completely clueless as to why (a) it only appears in some
OS (though this has changed over time) and (b) it does not seem to be
a problem with derfinderPlot on the build reports for the same OS.
##
