Re: [Bioc-devel] Bioconductor credentials issue

2020-06-19 Thread Chris Eeles
Hi Nitesh, I had to reset the password but yes I can. Best, Chris From: Nitesh Turaga Sent: Friday, June 19, 2020 10:40:41 AM To: Chris Eeles Cc: bioc-devel@r-project.org Subject: Re: [Bioc-devel] Bioconductor credentials issue Hi Chris, Let�s try it this

Re: [Bioc-devel] [External] Re: updating package on the development version

2020-06-19 Thread Dwivedi, Bhakti
Thank you for your response. Quick question, I am getting the warning and below error message. any suggestions or is there a link that I can follow to get help and fix it? ** installing vignettes Warning in file(con, "w") : cannot open file

Re: [Bioc-devel] Lost bioconductor email

2020-06-19 Thread Nitesh Turaga
Hi Jurrian, The email listed on your account is jurriandekan...@gmail.com . It is the same email you are using now. You have never activated your BiocCredentials account. You should first https://git.bioconductor.org/BiocCredentials/account_activation/

Re: [Bioc-devel] Bioconductor credentials issue

2020-06-19 Thread Nitesh Turaga
Hi Chris, Let’s try it this way. It seems that the maintainer listed on all the packages is with the email “benjamin.haibe.ka...@utoronto.ca ”. I’m guessing you have access to this email address, i.e see the emails which go this address (or are

Re: [Bioc-devel] Maintainer transfer

2020-06-19 Thread Nitesh Turaga
Hi Jakob, It seems your didn’t get the BiocCredentials email from me. But you have an account with the email "jakob.wir...@embl.de ”. It is associated with the SIAMCAT package. Once you add your SSH keys you should be able to access the package. Try again to

Re: [Bioc-devel] Problem installing sesameData on locked down server

2020-06-19 Thread Schneper, Lisa M.
Dear Lori, Thank you. I'll forward your e-mail to our IT team and see if they can help. If and when you do implement the export function in the Hubs, please let me know. Best, Lisa From: Shepherd, Lori Sent: Friday, June 19, 2020 7:48 AM To: Schneper, Lisa

Re: [Bioc-devel] Bioconductor package devel site not updating

2020-06-19 Thread Hoffman, Gabriel
___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel

Re: [Bioc-devel] Problem installing sesameData on locked down server

2020-06-19 Thread Shepherd, Lori
It is our understanding that for servers there is normally one main node that has internet access while the other server nodes do not and that all nodes would have access to some shared drive/space. We suggest asking your IT team to download the resources you need for analysis to the shared

Re: [Bioc-devel] Bioconductor package devel site not updating

2020-06-19 Thread Shepherd, Lori
Hello, The message you sent appears blank. So I'll take my best guess at what you are referring to: Please see this post indicating that we are having trouble with our website and are in process of fixing it. We have located the issue and pushed a fix and once applied the landing pages

Re: [Bioc-devel] updating package on the development version

2020-06-19 Thread Shepherd, Lori
Please see this post indicating that we are having trouble with our website and are in process of fixing it. We have located the issue and pushed a fix and once applied the landing pages should generate properly. https://stat.ethz.ch/pipermail/bioc-devel/2020-June/016923.html Please check

Re: [Bioc-devel] Website Not Updating

2020-06-19 Thread Shepherd, Lori
No this has nothing to do with your package. We located the issue already. But thank you for your concern. Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263