...it would be useful to know whether 'timeout' settings, e.g., options(timeout
= 180) improves things. I've introduced pull request on BiocManager to do this,
at
https://github.com/Bioconductor/BiocManager/pull/81
Martin
On 11/5/20, 11:04 AM, "Martin Morgan" wrote:
I noticed in
I noticed in Johannes' message
> In addition: Warning messages:
...
> 2: In download.file(url, destfile, method, mode = "wb", ...) :
> URL
'https://bioconductor.org/packages/3.13/data/experiment/src/contrib/msdata_0.31.0.tar.gz':
Timeout of 60 seconds was reached
I looked at
Thanks Mike!
that did the trick
cheers, jo
Johannes Rainer, PhD
Eurac Research
Institute for Biomedicine
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Hi Jo,
There was some discussion of a similar issue on the support forum at
https://support.bioconductor.org/p/p132470/
The suggestion there was to try changing R's download.file.method option
e.g. options(download.file.method = "curl")
Best,
Mike
On Thu, 5 Nov 2020 at 13:21, Rainer Johannes
Hi Johannes,
I’ll take a look at this and get back to you.
Best,
Nitesh
> On Nov 5, 2020, at 7:21 AM, Rainer Johannes wrote:
>
> Dear all,
>
> I'm unable to install the "msdata" package for the current BioC 3.13 release.
> I keep getting the following error:
>
>>
Dear all,
I'm unable to install the "msdata" package for the current BioC 3.13 release. I
keep getting the following error:
> BiocManager::install("msdata")
Bioconductor version 3.13 (BiocManager 1.30.10), R Under development (unstable)
(2020-10-24 r79367)
Installing package(s) 'msdata'
