Re: [Bioc-devel] How to change the name of a package on Bioconductor

2021-02-17 Thread Yu Huihui
Thank you, Martin, I have renamed 'vasp' to "VaSP" in release and devel branches. I will wait for the build result. If it success, I will keep the name "VaSP" and just maintain "VaSP". Huihui --Original-- From:

Re: [Bioc-devel] How to change the name of a package on Bioconductor

2021-02-17 Thread Martin Morgan
Your package will build under the new name. When it builds successfully, the url https://bioconductor.org/packages/VaSP will point to the new landing page. The user will install it with `BiocManager::install("VaSP")`. The user will use the package with `library("VaSP")`. The old version of

Re: [Bioc-devel] How to change the name of a package on Bioconductor

2021-02-17 Thread Yu Huihui
Hello, I am just following my last email. I find it is a bad way to change package name. An alternative way is to let the link jump to the package webpage, that is both http://bioconductor.org/packages/vasp and http://bioconductor.org/packages/VaSP can jump to

Re: [Bioc-devel] R-CMD-check fails on ubuntu-20.04 (release)

2021-02-17 Thread Catherine Ross
Hi Robert, Martin, Thank you both for your responses! I wasn’t able to recreate the issue on the Ubuntu docker image (only when you try to fail do you not fail… ), but adding the line `sudo apt-get install -y libglpk-dev` to my Github Action workflow did the trick. Catherine On Feb 16, 2021,

[Bioc-devel] CRAN checks failed by downloading ‘reactome.db’ package (WARNING Ubuntu, OK for Windows)

2021-02-17 Thread JEANNERET Florian
Hello all ! I need some help to "build my package" using reactome.db for reactomePA functions. In fact, builds and remote downloads have failed for Ubuntu but not for Windows 10 at reactome.db downloading. The same appears when I try to download reactome.db alone. Archive downloading [url][1]

Re: [Bioc-devel] Change of package mantainer

2021-02-17 Thread Nitesh Turaga
Hi, You have to change the name on the DESCRIPTION file. Everything else is taken care of. Best, Nitesh From: Luo Weijun Date: Wednesday, February 17, 2021 at 11:53 AM To: Nitesh Turaga Subject: Re: Change of package mantainer Great, thank you Nitesh. We will work on it. Note that I has