Thanks, Hervé for your reply.
Now, this error has been fixed (
http://bioconductor.org/checkResults/3.16/bioc-LATEST/miRspongeR/).
According to your suggestion, I have just imported the functions used in
miRspongeR from SPONGE. In addition, I have removed the line
'library(SPONGE)' in vignettes.
On 21/09/2022 07:57, Hervé Pagès wrote:
Just a workaround and not a real solution but maybe try to switch the
order of the clusterProfiler and SPONGE reports?
Oops, I meant "imports", not "reports".
But, again, reducing the huge number of dependencies of both miRspongeR
and SPONGE should
