Re: [Bioc-devel] Proposing patch to Bioconductor package

On 14/01/2023 10:41 a.m., Duncan Murdoch wrote: On 14/01/2023 9:50 a.m., Vincent Carey wrote: Thanks for checking in Duncan.  I don't believe we have a guideline on this. We have code.bioconductor.org that facilitates search of the entire codebase.  If you

Re: [Bioc-devel] Proposing patch to Bioconductor package

On 14/01/2023 9:50 a.m., Vincent Carey wrote: Thanks for checking in Duncan.  I don't believe we have a guideline on this. We have code.bioconductor.org that facilitates search of the entire codebase.  If you provide a list of the functions that should not be

Re: [Bioc-devel] Proposing patch to Bioconductor package

Thanks for checking in Duncan. I don't believe we have a guideline on this. We have code.bioconductor.org that facilitates search of the entire codebase. If you provide a list of the functions that should not be used, I will see about making a focused message to the developers who need to

[Bioc-devel] Proposing patch to Bioconductor package

To BioC Devel: I'm updating the rgl package. I think about 30 Bioconductor packages depend on it, and some of them are using obsolete functions which are going to be deprecated in the next release. I'd like to inform those maintainers so their packages still work. Are there specific BioC