Dear Mike,
thanks for the excellent explanation - and yes, I think you're right (after
some feedback also from Vince and Herve). I did re-save the objects bundled
within xcms with a fresh installation and am now re-running a bunch of tests
with different containers.
thanks!
jo
Johannes Rainer
Hi Johannes,
I think RCurl is imported via the package dependency chain of xcms ->
SummarizedExperiment -> GenomeInfoDb -> RCurl.
It looks like Hervé removed this dependency from GenomeInfoDb recently (
https://code.bioconductor.org/browse/GenomeInfoDb/commit/9562907f6800cf6052fff9fb2f85329ff4479
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