[Bioc-devel] No write permissions to push changes to my devel package

2018-01-11 Thread Andreas Kapouranis
Hi, I have developed a package BPRMeth in Bioconductor and now I want to make changes however it seems that I *do not have write permissions* to my own package in g...@git.bioconductor.org I submitted my github ID (which contains my public SSH keys) to the google form (however I still have not

Re: [Bioc-devel] Submitted package not available in Bioconductor 3.4

2016-10-21 Thread Andreas Kapouranis
://homepages.inf.ed.ac.uk/s1263191/ e-mail : C.A.Kapourani.ed.ac.uk : kapouranis.andr...@gmail.com On Fri, Oct 21, 2016 at 11:14 AM, Martin Morgan < martin.mor...@roswellpark.org> wrote: > On 10/21/2016 05:30 AM, Andreas Kapouranis wrote: > >> Hi, >> >> Recently I subm

Re: [Bioc-devel] BiocGenerics attaches when methods package is imported

2016-02-16 Thread Andreas Kapouranis
d on GenomicRanges. > > I guess R is loading the data to check the docs. When the methods > namespace is loaded, it conveniently attaches the package defining the > class. > On Feb 16, 2016 3:48 AM, "Andreas Kapouranis" < > kapouranis.andr...@gmail.com> wrote: > >

Re: [Bioc-devel] BiocGenerics attaches when methods package is imported

2016-02-15 Thread Andreas Kapouranis
would be helpful to have a reproducible example, i.e., your actual > package or a skeleton of it that reproduces the issue. Btw, you might > be able to debug this behavior by: > > debug(tools::undoc) > tools::undoc(dir=yourPackageDir) > > > > On Mon, Feb 15, 2016 at 7:52 AM, Andre

Re: [Bioc-devel] BiocGenerics attaches when methods package is imported

2016-02-15 Thread Andreas Kapouranis
hat the > methods package is imported when it actually isn't. Do you still get that > warning if you update the NAMESPACE file? > > Cheers > Joris > > On Mon, Feb 15, 2016 at 4:52 PM, Andreas Kapouranis < > kapouranis.andr...@gmail.com> wrote: > >> Hi, >> &g

[Bioc-devel] BiocGenerics attaches when methods package is imported

2016-02-15 Thread Andreas Kapouranis
Hi, I am developing a package for Bioconductor, and I have a weird issue when importing the 'methods' package. Before I add the 'methods' package in Imoprts in the DESCRIPTION file, I pass the CMD check without any warnings. However, when I add the 'methods' package in the Imports field, I get a