[Bioc-devel] BiocCheck - warning: files are over 5MB

2018-03-09 Thread Claris Baby via Bioc-devel
Dear all,I am trying to run BiocCheck("/home/package_name", list(`no-check-vignettes`=TRUE)) There is no error but I am getting the following warning. $warning [1] "The following files are over 5MB in size: 'dataset/Caenorhabditis_elegans.WBcel235.dna.chromosome.I.fa'." This as well as other

[Bioc-devel] error while trying to run BiocCheck

2018-03-03 Thread Claris Baby via Bioc-devel
Dear all,I am trying to build a package for RNA-seq analysis combining different existing packages in bioconductor and am facing problem while trying to run  BiocCheck("/home/package_name", `no-check-vignettes`=TRUE) The error generated is as follows: This is BiocCheck version 1.14.0. BiocCheck

[Bioc-devel] warning: checking Rd cross-references

2018-02-12 Thread Claris Baby via Bioc-devel
Dear all,I am trying to build a package for RNA-seq analysis combining different existing packages in bioconductor and am facing problem while trying to run Check PackageThere is no error but a warning saying checking Rd cross-references ... WARNING Missing link or links in documentation object