I'm trying to pileup some BAMs and I'm finding that certain loci in certain
files produce seg faults. I've tried to find some common property, but I'm at a
loss. I've selected a single locus in a single file that reproducibly produces
the problem. The BAM file and its index are on our FTP site.
I'm trying to submit a new package. I have set the version number to 0.99.0 as
indicated at http://www.bioconductor.org/developers/package-submission/ .
However, I get a warning from BiocCheck that says:
* Checking new package version number...
* RECOMMENDED: y of x.y.z version should b
