Re: [Bioc-devel] banocc: Bioconductor BUILD error

2019-08-06 Thread George Weingart
> Cheers > > Get Outlook for Android <https://aka.ms/ghei36> > > ------ > *From:* George Weingart > *Sent:* Tuesday, August 6, 2019 6:47:51 PM > > *To:* Shepherd, Lori > *Cc:* Bioc-devel > *Subject:* Re: banocc: Biocondu

Re: [Bioc-devel] banocc: Bioconductor BUILD error

2019-08-06 Thread George Weingart
Hi Lori, I followed all the instructions in http://bioconductor.org/developers/how-to/git/maintain-bioc-only/. See log below. Is there anything that I need to do at this point ? Thanks so much for all your help ! George Weingart PhD Huttenhower Lab Harvard School of Public Health *Log

Re: [Bioc-devel] banocc: Bioconductor BUILD error

2019-08-05 Thread George Weingart
Hope this helps > > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Cancer Institute > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > -- > *From:* George Weingar

Re: [Bioc-devel] banocc: Bioconductor BUILD error

2019-08-05 Thread George Weingart
be? I don't want to 'try' things so I do not cause damage to the repository . Thanks! George Weingart Thanks! On Mon, Aug 5, 2019 at 5:01 AM Shepherd, Lori wrote: > Can you please display the results from > > > git remote -v > > > It looks like you may have not setu

Re: [Bioc-devel] banocc: Bioconductor BUILD error

2019-08-04 Thread George Weingart
Hi Lori and Bioc-Devel, I followed Lori's instructions but the push is failing - I must be doing something wrong. Here is the log: Can you tell me how to do it right ? Thanks! George Weingart PhD Huttenhower Lab Harvard School of Public Health Tanias-MacBook-Air:banocc georgeweingart$ git

Re: [Bioc-devel] banocc: Bioconductor BUILD error

2019-08-01 Thread George Weingart
know? Thanks and best regards, George Weingart PhD Huttenhower Lab Harvard School of Public Health On Mon, Jul 15, 2019 at 5:57 PM George Weingart wrote: > Hello Lori, > > Done ! > > I removed the two references to c++11 from the package, ran a BUILD and a > CHECK and they we

Re: [Bioc-devel] banocc: Bioconductor BUILD error

2019-07-15 Thread George Weingart
Hello Lori, Done ! I removed the two references to c++11 from the package, ran a BUILD and a CHECK and they were clean. Pushed the changes. Below, the log of the push. Let me know what you find in the BiocCheck space pertaining the Sweave error. Thank you ! Best regards, George Weingart PhD

Re: [Bioc-devel] banocc: Bioconductor BUILD error

2019-07-15 Thread George Weingart
Thanks Lori! Will do. Let me know about BiocCheck. Thanks! George Weingart On Mon, Jul 15, 2019 at 10:26 AM Shepherd, Lori < lori.sheph...@roswellpark.org> wrote: > I can look into the BiocCheck ERROR for future development. It would be > good to figure out why this

[Bioc-devel] banocc: Bioconductor BUILD error

2019-07-15 Thread George Weingart
. Failed Build 2. Successful BUILD after removing c++11 references 3. Successful R CMD CHECK 4. Failed BiocCheck Thank you! George Weingart PhD Huttenhower Lab Harvard School of Public Health Summary of the problem: 1. Banocc has been in Bioconductor

[Bioc-devel] Fwd: banocc problems reported in the Multiple platform build/check report for BioC 3.9

2019-06-24 Thread George Weingart
he package) and how to recreate it. Can you assist solving the issue ? Thanks! George Weingart PhD Huttenhower Lab Harvard School of Pubilc Health -- Forwarded message - From: Date: Mon, Jun 24, 2019 at 11:36 AM Subject: banocc problems reported in the Multiple platfor

Re: [Bioc-devel] Need update access agaisnt package 'banocc'

2018-10-29 Thread George Weingart
Could I trouble you to look at banocc 1.5.2 that I pushed: it has a warning- Is that ok or can we leave it like that to be released? On Fri, Oct 19, 2018 at 4:07 PM George Weingart wrote: > Could I trouble you to look at banocc 1.5.2 that I pushed: it has a > warning- > Is that ok

Re: [Bioc-devel] Need update access agaisnt package 'banocc'

2018-10-19 Thread George Weingart
to appear on the > build report and landing pages - i.e. we do one pull, build, check, > propagate in 24 hours - so if your commit was after the pull for the day it > wont be until the following day > > > > > On Oct 18, 2018, at 10:03 AM, George Weingart > wrote: > > > &g

Re: [Bioc-devel] Need update access agaisnt package 'banocc'

2018-10-17 Thread George Weingart
by fallthru (or you mis-spelled the reponame) Am I doing something wrong or am I still not permitted to update the repository ? Thanks! George Weingart PhD Huttenhower Lab Harvard School of Public Health DETAILS List of remotes Tanias-MacBook-Air:banocc georgeweingart$ git remote -v origin https

[Bioc-devel] Need update access agaisnt package 'banocc'

2018-10-17 Thread George Weingart
kage, made the necessary changes, ran a successful BUILD , CHECK, BiocCheck and committed the changes and am ready to push the changes, but I am getting a "permission denied" message - and indeed, I see in my profile I can update only ccrepe. I need update access against 'banocc" Tha