Re: [Bioc-devel] Class for differentially expressed genes?

2020-03-09 Thread Roman Hillje via Bioc-devel
t;> >> Lori Shepherd >> >> Bioconductor Core Team >> >> Roswell Park Comprehensive Cancer Center >> >> Department of Biostatistics & Bioinformatics >> >> Elm & Carlton Streets >> >> Buffalo, New York 14263 >> >> _

[Bioc-devel] Class for differentially expressed genes?

2020-03-09 Thread Roman Hillje via Bioc-devel
Hi all, I was wondering if there is a class for results of differential gene expression analysis. I couldn’t find anything generic. Perhaps it’s too similar to a simple data frame, but I like the idea of having a consistent format. I would imagine something that holds gene names, statistics

Re: [Bioc-devel] Version when submitting to Bioconductor

2020-01-31 Thread Roman Hillje via Bioc-devel
ake note of the reason when you submit your package. > > Lori Shepherd > Bioconductor Core Team > Roswell Park Comprehensive Cancer Center > Department of Biostatistics & Bioinformatics > Elm & Carlton Streets > Buffalo, New York 14263 > From: Bioc-devel on

[Bioc-devel] Version when submitting to Bioconductor

2020-01-30 Thread Roman Hillje via Bioc-devel
Hi everyone, I’d like to submit a package soon but am unsure about the versioning. I’m expecting there to be some revisions to the code which will then later require that I bump the version count to trigger the rebuild. Currently, I’m at v1.1.1 (GitHub). If/when the package is accepted, I’d