Re: [Bioc-devel] [devteam-bioc] Segfault in Rsamtools when R built with static libz

Martin and Michael, It looks like I have been conflating two issues when trying to deal with these things. The problem of grabbing the system libz seems to have gone away in the Rsamtools case earlier than in the libR.so case during my process. wwI will check back in if something raises it's head

Re: [Bioc-devel] [devteam-bioc] Segfault in Rsamtools when R built with static libz

Maybe Gabe could share the linker line. I think (from the man page) as long as the directory with the static lib comes first with -L, it should find the static lib, not the shared object. On Wed, Jul 27, 2016 at 6:48 AM, Martin Morgan wrote: > Hi Gabe -- > > On

Re: [Bioc-devel] [devteam-bioc] Segfault in Rsamtools when R built with static libz

Hi Gabe -- On 07/21/2016 12:08 PM, Maintainer wrote: Hi all, I build the R installations on our research cluster. Unfortunately we are running an older OS so the system versions of various libraries (libz, bz2, pcre and libcurl, specifically) are not modern enough to build R with. For