Re: [Bioc-devel] RCAS build error on Nebbiolo2 - Missing BiocManager

2023-10-27 Thread Hervé Pagès
Hi Bora, BiocManager is installed on the machine but 'R CMD check' does not "see" it because you don't have it listed in Suggests. This 'R CMD check' behavior is controlled by the _R_CHECK_SUGGESTS_ONLY_ behavior and is only enabled on our Linux builders for now. However, please note that the

[Bioc-devel] RCAS build error on Nebbiolo2 - Missing BiocManager

2023-10-27 Thread bora.u...@mdc-berlin.de
Hi Bioc-Devel Team, My package RCAS has been getting build errors on Nebbiolo2. It fails to run the tests/examples/vignettes all due to a missing dependency, which can’t be installed because BiocManager is not available. Here is the build report: