Re: [Bioc-devel] Bioconductor-mirror permanently removed August 25th

2017-09-06 Thread Jim Hester
I understand the fragmentation concerns, just felt the mirrors should have been maintained at least until a reasonable alternative exists. The diverging history issues should be resolvable by resetting the state to the canonical bioconductor repository and force pushing necessary changes to their

Re: [Bioc-devel] Bioconductor-mirror permanently removed August 25th

2017-09-06 Thread Shepherd, Lori
tember 6, 2017 11:21:34 AM To: Jim Hester Cc: bioc-devel@r-project.org Subject: Re: [Bioc-devel] Bioconductor-mirror permanently removed August 25th Hi Jim We are more worried about the confusion it creates among the users. Users have tried to push their commits to the bioconductor-mirror instead

Re: [Bioc-devel] Bioconductor-mirror permanently removed August 25th

2017-09-06 Thread Martin Morgan
On 09/06/2017 11:28 AM, Robert M. Flight wrote: I agree with Jim. It has been very useful to have the Bioconductor GitHub mirror to examine code, and the CRAN mirror as well. A post-hook to push there would be very useful. The mirror causes tremendous confusion on several fronts. The updates c

Re: [Bioc-devel] Bioconductor-mirror permanently removed August 25th

2017-09-06 Thread Turaga, Nitesh
Hi Jim We are more worried about the confusion it creates among the users. Users have tried to push their commits to the bioconductor-mirror instead of the bioconductor git server. Another source of confusion is, some maintainers have forked their packages from the Bioconductor-mirror, and have

Re: [Bioc-devel] Bioconductor-mirror permanently removed August 25th

2017-09-06 Thread Robert M. Flight
I agree with Jim. It has been very useful to have the Bioconductor GitHub mirror to examine code, and the CRAN mirror as well. A post-hook to push there would be very useful. -Robert On Wed, Sep 6, 2017 at 11:07 AM Jim Hester wrote: > This mirror could be relatively simply supported by setting

Re: [Bioc-devel] Bioconductor-mirror permanently removed August 25th

2017-09-06 Thread Jim Hester
This mirror could be relatively simply supported by setting up an additional remote in the server side repositories and adding a post-receive hook to each repository that simply pushes to the GitHub mirror remote after commits are received. https://git-scm.com/book/gr/v2/Customizing-Git-Git-Hooks

Re: [Bioc-devel] Bioconductor-mirror permanently removed August 25th

2017-09-01 Thread Turaga, Nitesh
Hi Maintainers, The Bioconductor-mirror has been permanently deprecated. Please do not use this anymore. Best, Nitesh > On Aug 17, 2017, at 3:53 PM, Turaga, Nitesh > wrote: > > Hi Maintainers, > > The https://github.com/Bioconductor-mirror is now stale after Bioconductor’s > git transiti

[Bioc-devel] Bioconductor-mirror permanently removed August 25th

2017-08-17 Thread Turaga, Nitesh
Hi Maintainers, The https://github.com/Bioconductor-mirror is now stale after Bioconductor’s git transition. We are no longer going to support it, and will be taking it offline permanently on August 25th (next Friday). If you have “forked” a repository from the Bioconductor-mirror, you will be