Re: [Bioc-devel] Bioconductor package build fails

2018-10-11 Thread Martin Morgan
It might make sense to seriously throttle your use of parallel evaluation in your vignette / example code, perhaps even defaulting to serial evaluation. This is also relevant to resource use on the build machines. I'm not really sure of the details but it seems like the problem is that the

Re: [Bioc-devel] Bioconductor package build fails

2018-10-11 Thread Hoffman, Gabriel
Thanks for your help. This just showed up last night. I will wait few more days and see if it continues to be an issue. Also, I’ll add pander - Gabriel On 10/11/18, 7:01 PM, "Hervé Pagès" wrote: >Hi Gabriel, > >I'm not able to reproduce this either. See my sessionInfo() >at the end

Re: [Bioc-devel] Bioconductor package build fails

2018-10-11 Thread Hervé Pagès
Hi Gabriel, I'm not able to reproduce this either. See my sessionInfo() at the end (obtained after running all the code in the variancePartition.Rnw vignette). Did this error just appear today or yesterday, so would follow your last commit to the RELEASE_3_7 branch? Or did it appear before e.g.

[Bioc-devel] Bioconductor package build fails

2018-10-11 Thread Hoffman, Gabriel
I am the developer of the variancePartition package, and I recently made some very small changes to the documentation of my package. The latest version 1.10.3 builds correctly on Bioconductor's Windows and OS X machines but fails on Ubuntu: