Re: [Bioc-devel] DMRcaller build error

2018-04-27 Thread Radu Zabet
Thanks for the feedback! I've just done that! Radu On Fri, Apr 27, 2018 at 8:40 PM, Hervé Pagès wrote: > On 04/27/2018 12:31 PM, Radu Zabet wrote: > >> Thank you for that Herve! >> >> I managed to figure out what the problem was. >> >> I was using a GRangesList

Re: [Bioc-devel] DMRcaller build error

2018-04-27 Thread Hervé Pagès
On 04/27/2018 12:31 PM, Radu Zabet wrote: Thank you for that Herve! I managed to figure out what the problem was. I was using a GRangesList constructor and,  when validating the argument passed to the function, I was checking if the class was GRangesList instead of CompressedGRangesList.

Re: [Bioc-devel] DMRcaller build error

2018-04-27 Thread Radu Zabet
Thank you for that Herve! I managed to figure out what the problem was. I was using a GRangesList constructor and, when validating the argument passed to the function, I was checking if the class was GRangesList instead of CompressedGRangesList. Radu On Fri, Apr 27, 2018 at 8:11 PM, Hervé

[Bioc-devel] DMRcaller build error

2018-04-20 Thread Radu Zabet
Hi everyone, I am the maintainer of DMRcaller. I did an update yesterday and on the build report today, the package failed with the error. Error: processing vignette 'DMRcaller.Rnw' failed with diagnostics: methylationProfile needs to be a GRangesList Execution halted On my machine (MacOS