Re: [Bioc-devel] NCBI taxonomy annotation

Hi Levi, I recently just put together a new package called orthogene (currently under review by bioc) that has a convenience function for flexibly mapping species identifiers to any ID types (including NCBI taxa IDs): map_species() It may not be

[Bioc-devel] NCBI taxonomy annotation

Does anyone else do mapping between NCBI taxids, names, and ranks? We do this in curatedMetagenomicData and soon other packages, currently using external files that lack provenance and versioning, so Ludwig Geistlinger was looking for Bioconductor annotation resources. The closest he found was in