Re: [Bioc-devel] No vignette contents page/fig refs with Devtools build

2015-03-16 Thread Dan Tenenbaum
- Original Message - > From: "Steven Barrett" > To: bioc-devel@r-project.org > Sent: Monday, March 16, 2015 8:54:58 AM > Subject: [Bioc-devel] No vignette contents page/fig refs with Devtools build > > Hello, > > I have a problem with the automa

Re: [Bioc-devel] No vignette contents page/fig refs with Devtools build

2015-03-16 Thread Andrzej OleÅ›
Dear Steven, thank you for your inquiry. It would be helpful if you could provide more details regarding your issue. In particular, a minimal example reproducing the problem would be a great starting point. Cheers, Andrzej On Mon, Mar 16, 2015 at 4:54 PM, Steven Barrett wrote: > Hello, > > I h

[Bioc-devel] No vignette contents page/fig refs with Devtools build

2015-03-16 Thread Steven Barrett
Hello, I have a problem with the automated vignette construction during a devtools build. The vignette is encoded in an .rnw file and I'm using Knitr. When I compile the .rnw in RStudio it yields a .pdf with the contents page and figure label references properly instantiated. However, when I