Re: [Bioc-devel] Submitting a workflow

2014-09-03 Thread Dan Tenenbaum
- Original Message - > From: "Michael Love" > To: "Andrzej Oleś" > Cc: bioc-devel@r-project.org > Sent: Wednesday, September 3, 2014 7:10:50 AM > Subject: Re: [Bioc-devel] Submitting a workflow > > Thanks. I didn't poke around enou

Re: [Bioc-devel] Submitting a workflow

2014-09-03 Thread Michael Love
Thanks. I didn't poke around enough. Maybe there could be a link from http://www.bioconductor.org/help/workflows/ for "How to contribute a workflow" On Wed, Sep 3, 2014 at 9:05 AM, Andrzej Oleś wrote: > Hi Mike, > > see also http://www.bioconductor.org/developers/how-to/workflows/ > > If you au

Re: [Bioc-devel] Submitting a workflow

2014-09-03 Thread Andrzej Oleś
Hi Mike, see also http://www.bioconductor.org/developers/how-to/workflows/ If you author your vignette in markdown you could try using BiocStyle formatting, see http://www.bioconductor.org/packages/devel/bioc/vignettes/BiocStyle/inst/doc/HtmlStyle.html Best, Andrzej On Wed, Sep 3, 2014 at 2:59

Re: [Bioc-devel] Submitting a workflow

2014-09-03 Thread Vincent Carey
here's the guide i am aware of. a link should be on the basic workflow page as a 'how to'. https://hedgehog.fhcrc.org/bioconductor/trunk/madman/workflows/README.md On Wed, Sep 3, 2014 at 7:47 AM, Michael Love wrote: > hi, > > I'd like to contribute a workflow, but I don't see a guide on how t

[Bioc-devel] Submitting a workflow

2014-09-03 Thread Michael Love
hi, I'd like to contribute a workflow, but I don't see a guide on how to submit a workflow on the website. Do the workflows have the same versioning system x.y.z as software packages? Is it possible to use the github bridge with workflows? thanks, Mike