Re: [Bioc-devel] git help

2018-01-09 Thread Kevin Horan
Nitesh,   I have re-cloned it, everything looks good. Thanks for your help. Can you please make sure that the duplicate commit check has been re-enabled for this repo? It was previously disabled. Kevin On 01/09/2018 10:03 AM, Turaga, Nitesh wrote: Hi Kevin, Your repository should now be

Re: [Bioc-devel] git help

2018-01-09 Thread Turaga, Nitesh
Hi Kevin, Your repository should now be fixed. Please re-clone your repository. Best, Nitesh > On Jan 8, 2018, at 8:39 PM, Kevin Horan wrote: > > Nitesh, > >Sorry, just saw your email now. You can go ahead and make those changes. > Thanks for all your help. > >

Re: [Bioc-devel] git help

2018-01-08 Thread Kevin Horan
Nitesh, Sorry, just saw your email now. You can go ahead and make those changes. Thanks for all your help. Kevin On 01/07/2018 11:22 AM, Turaga, Nitesh wrote: Hi Kevin, One last message, give me a green light to fix your repository once you have had a chance to see my emails. Best,

Re: [Bioc-devel] git help

2018-01-07 Thread Turaga, Nitesh
Hi Kevin, One last message, give me a green light to fix your repository once you have had a chance to see my emails. Best, Nitesh > On Jan 7, 2018, at 2:17 PM, Turaga, Nitesh > wrote: > > Now your version numbers don’t match. You skip versions without those

Re: [Bioc-devel] git help

2018-01-07 Thread Turaga, Nitesh
Now your version numbers don’t match. You skip versions without those commits Your history is supposed to look like this, commit 5a1ad6ff08747d1380875840fe96d3633c210ee2 (HEAD -> master) Author: khoran Date: Sun Jan 7 09:44:16 2018 -0800 History was rolled back 6

Re: [Bioc-devel] git help

2018-01-07 Thread Turaga, Nitesh
Hi Kevin, It seems you have lost a few commits which are important in tracking RELEASE’s in Bioconductor. commit fb5868c2fdfa607b52e467881212b3619a8b0ae9 (HEAD -> master) Author: Hervé Pagès Date: Mon Oct 30 12:52:08 2017 -0400 bump x.y.z versions to odd y after

Re: [Bioc-devel] git help

2018-01-07 Thread Kevin Horan
Nitesh, I have pushed changes to both the master and RELEASE_3_6 branches now. Kevin On 01/05/2018 11:14 AM, Turaga, Nitesh wrote: Hi Kevin, Please overlay the commits so that we can get your package building on our build machines. Please do this soon. You also have to make

Re: [Bioc-devel] git help

2018-01-04 Thread Turaga, Nitesh
Hi Kevin, I have your package reset to this commit e3a8d2122a65305c478276e538faace277ea9ed6. Please check. You will need to overlay all the commits including the new release on top of this (RELEASE_3_6). If you have any questions further on this, please ask before pushing to Bioconductor.

Re: [Bioc-devel] git help

2018-01-03 Thread Kevin Horan
Nitesh, That sounds great, thanks. Kevin On 01/03/2018 01:53 PM, Turaga, Nitesh wrote: Hi Kevin, I can help you with this. I can take you back to a state before August 18th and put that repository up on our Git server. From that point onwards you’d have to reapply all the changes on

Re: [Bioc-devel] git help

2018-01-03 Thread Kevin Horan
Nitesh, I tried to re-construct the repo starting from what is left in the SVN repository, but I couldn't get all the branches to come over and it just generally looks too different to easily replace the bioc repo. I was thinking though, if its easy for you to clobber the current