Re: [Bioc-devel] remove history vignettes

2015-11-19 Thread 顾祖光
That is great! Thank you! On Thu, Nov 19, 2015 at 5:22 PM, Brian Long wrote: > All, > > Sorry about the slow reply. This should now be resolved, looking at : > > http://www.bioconductor.org/packages/release/bioc/html/ComplexHeatmap.html > > http://www.bioconductor.org/packages/devel/bioc/html/C

Re: [Bioc-devel] remove history vignettes

2015-11-19 Thread Brian Long
All, Sorry about the slow reply. This should now be resolved, looking at : http://www.bioconductor.org/packages/release/bioc/html/ComplexHeatmap.html http://www.bioconductor.org/packages/devel/bioc/html/ComplexHeatmap.html As you know, these pages are updated automatically, but a part of the

Re: [Bioc-devel] remove history vignettes

2015-11-17 Thread Leonardo Collado Torres
Hi, I have the same problem with changes I recently made in the devel branch of `derfinder`. The old vignettes were compiled the last time on November 4th and the new ones on November 12th. Maybe in the next 1-2 days (with the Wednesday nightly build) the old ones will be dropped. Cheers, Leo O

Re: [Bioc-devel] remove history vignettes

2015-11-17 Thread Gabe Becker
Well, You shouldn't expect the release branches to change at all based on anything you do on trunk. They never will. The release branch is (almost completely frozen), you shouldn't be making changes there generally. Changes in documentation are a grey area, I suppose, but I try to avoid those as w

Re: [Bioc-devel] remove history vignettes

2015-11-17 Thread 顾祖光
Thanks for your reply! I have already updated the package (also with bumping version numbers) for many times but these old vignettes are still there. They even exist in the release branch: http://www.bioconductor.org/packages/release/bioc/html/ComplexHeatmap.html On Tue, Nov 17, 2015 at 3:44 PM,

Re: [Bioc-devel] remove history vignettes

2015-11-17 Thread Gabe Becker
Zuguang, >From what I can see, you have not updated the version number of your package, so I suspect you'll find that none of your changes have propogated at all, though I can't entirely swear to that. I believe Bioc packages only update in the repo (which I assume is also when the splash-pages a

[Bioc-devel] remove history vignettes

2015-11-17 Thread 顾祖光
Hi, I am developing a package called ComplexHeatmap and re-format the vignettes recently. I deleted the old vignettes and created several new vignettes. But when I look at the web page of the package ( http://bioconductor.org/packages/devel/bioc/html/ComplexHeatmap.html), the old vignette files (t