Hej Hervé!
This is now working for me and it also builds fine on Bioc.
I tend to use biocValid(fix=TRUE) and if I've understood the output correctly,
it seems to me that the function will fetch the most recent version available,
building it from source if necessary.
Cheers,
Nico
Hi Nico,
The current version of GenomicAlignments is 1.7.8. Unfortunately the
Mavericks binary that is currently available via biocLite() is lagging
behind (1.7.3) so you need to install the latest GenomicAlignments from
source:
biocLite("GenomicAlignments", type="source")
Hopefully you'll
Hej!
I'm getting this error when using summarizrOverlaps:
Error in findOverlaps(features, reads, algorithm = match.arg(algorithm), :
could not find symbol "algorithm" in environment of the generic function
Here is the stack:
16: summarizeOverlaps(features, chunk, ignore.strand =
