Re: [Bioc-devel] xcms adjustRtime-obiwarp Error

2017-07-27 Thread Rainer Johannes
Dear Riccardo, I will look closer into this. In the meantime it might help if you try a different binSize in the ObiwarpParam. Also, could you please add an issue with this error on https://github.com/sneumann/xcms ? I can then track and relate all changes to the issue. thanks, jo On 27 Jul

[Bioc-devel] xcms adjustRtime-obiwarp Error

2017-07-27 Thread Riccardo Romoli
Dear xcms devel, running the latest stable xcms version I get the following error: > xod <- adjustRtime(xod, param = ObiwarpParam()) Sample number 3 used as center sample. Aligning pl55_06h_01.mzXML against pl55_03h_01.mzXML ... Error: BiocParallel errors element index: 1, 2, 3, 4, 5 first