Re: [Bioc-devel] saturday build

2016-08-31 Thread Hervé Pagès 

moscato1 became unstable again. I rebooted it this evening and
hopefully we'll have a build report on Friday. Sorry for the
inconvenience...

H.

On 08/31/2016 07:39 PM, Kasper Daniel Hansen wrote:

No build monday either it seems like?

On Tue, Aug 23, 2016 at 6:45 AM, Martin Morgan <
martin.mor...@roswellpark.org> wrote:


On 08/22/2016 09:01 PM, Kasper Daniel Hansen wrote:


Did the Saturday build not get started.  I have updated the experimental
data package, minfiData, and that was re-build on Saturday.  But minfi,
which has failed in level for some time due to minfiData, has not been
rebuild since last Wednesday.

Or is there some issue here that minfi does not get build again because it
failed and I have not pushed any updates to the package itself, only to
its
dependencies?



The Saturday builds failed to propagate, and I failed to catch this
yesterday. The culprit seems to be extremely slow windows builds. Martin



Best,
Kasper

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Re: [Bioc-devel] saturday build

2016-08-31 Thread Kasper Daniel Hansen 
No build monday either it seems like?

On Tue, Aug 23, 2016 at 6:45 AM, Martin Morgan <
martin.mor...@roswellpark.org> wrote:

> On 08/22/2016 09:01 PM, Kasper Daniel Hansen wrote:
>
>> Did the Saturday build not get started.  I have updated the experimental
>> data package, minfiData, and that was re-build on Saturday.  But minfi,
>> which has failed in level for some time due to minfiData, has not been
>> rebuild since last Wednesday.
>>
>> Or is there some issue here that minfi does not get build again because it
>> failed and I have not pushed any updates to the package itself, only to
>> its
>> dependencies?
>>
>
> The Saturday builds failed to propagate, and I failed to catch this
> yesterday. The culprit seems to be extremely slow windows builds. Martin
>
>
>> Best,
>> Kasper
>>
>> [[alternative HTML version deleted]]
>>
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[Bioc-devel] git mirror fails

2016-08-31 Thread Lara Urban 
Dear All,

I hope this is the right platform to post my question: I am currently
trying to update my package on the devel branch. It is available via a
GitHub repo. I followed the instructions (
http://bioconductor.org/developers/how-to/git-mirror/) and can commit/push
to GitHub, but when I switch to the devel branch and want to push again, I
am "unable to access 'https://github.com/Bioconductor-mirror/covRNA.git/': The
requested URL returned error: 403". However, I can access the URL via
browser. Does someone know what is going wring there? Please let me know if
you need further information.

Many thanks in advance.

Kind regards, Lara

-- 
Lara Urban

Predoctoral Fellow
EMBL-European Bioinformatics Institute
Wellcome Trust Genome Campus
Hinxton, Cambridge
CB10 1SD
United Kingdom

PhD Student
Wolfson College
University of Cambridge

phone:  + 49 (0) 176 76 37 99 03 <%2B%2044%20%280%29%201223%20494%20655>
email: lara.h.ur...@ebi.ac.uk 

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Re: [Bioc-devel] Git mirror out of sync

2016-08-31 Thread Angerer, Philipp via Bioc-devel 
hi, it happened 
again:https://github.com/Bioconductor-mirror/destinyout of 
sync… 


Von: "Angerer, Philipp via Bioc-devel"  
An: "Martin Morgan"  
CC: "bioc-devel"  
Gesendet: Donnerstag, 11. August 2016 13:05:58 
Betreff: Re: [Bioc-devel] Git mirror out of sync 

great, thanks! 


Von: "Martin Morgan"  
An: "Angerer, Philipp" , "bioc-devel" 
 
Gesendet: Donnerstag, 11. August 2016 12:54:50 
Betreff: Re: [Bioc-devel] Git mirror out of sync 

On 08/09/2016 04:18 AM, Angerer, Philipp via Bioc-devel wrote: 
> Hi, 
> 
> destiny ’s git mirror has been out of sync for quite some time. 
> 
> The currently latest SVN revision has bumped the version to 1.3.4 , but git 
> master is still on 1.3.0 . 
> 

This should be back on track now, please let us know if problems occur 
again. 

Martin 

> Thanks for looking at it, 
> Philipp 
> 
> 
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85764 Neuherberg

www.helmholtz-muenchen.de

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