[Bioc-devel] reopen issue (submission) on github

Good morning. I recently submitted a package via the Contributions repository (issue #660). Due to the "two weeks notice" policy, my submission/issue was closed whilst I was working on responding to reviewer suggestions. I have since made changes to the package in response to reviewer

Re: [Bioc-devel] reopen issue (submission) on github

The best solution is probably to comment on the github issue tagging the assigned review requesting the issue be reopened. Cheers, Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York

Re: [Bioc-devel] reopen issue (submission) on github

Perfect! Thank you. For future reference, how will this situation (submissions closed and then needing to be reopened later) be handled generally? Is an email to Bioc-devel the preferred stimulus for re-opening or is there another mechanism either in place or foreseen? Thanks again. From:

Re: [Bioc-devel] reopen issue (submission) on github

We will reopen the issue for you. Please make sure the webhook is still initialized to trigger builds on version bumps. Once the issue is open, please bump the version and commit to trigger a new build. Thank you for your interest in Bioconductor. Lori Shepherd Bioconductor Core Team

Re: [Bioc-devel] Build time-out on malbec1

It looks like this was resolved - The ERRORs on the report are now with coding and not Timeouts. Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263

Re: [Bioc-devel] Build time-out on malbec1

Hej Lori! Indeed. Thanks for answering though. Now, it seems to be an error propagating through from biomaRt, so I'll wait for that to be fixed. Best, Nico --- Nicolas Delhomme, PhD UPSC bioinformatics facility Manager Umeå Plant

[Bioc-devel] Batch Package Submission

Dear list, I am about to submit a new package. For my commodity (code reuse across other packages that I have done) I split my code into three separate packages: one for general utilities, one for task specific to omic data and one specifically for integrating multiple omics. Should I submit the

Re: [Bioc-devel] About MLSeq Package

Hi Gokmen, An account exits for you with email "gokmenzarar...@erciyes.edu.tr". This was the email associated with the svn user when the package was first accepted. I have changed the email to gokmenzarar...@hotmail.com

Re: [Bioc-devel] Batch Package Submission

Hi Paolo, On 05/17/2018 08:38 AM, Paolo Martini wrote: Dear list, I am about to submit a new package. For my commodity (code reuse across other packages that I have done) I split my code into three separate packages: one for general utilities, one for task specific to omic data and one