edgeR knows about LargeDataObject. It's your package that doesn't.
Gordon
On Fri, 27 Jun 2014, Dario Strbenac wrote:
Hello,
I never explicitly use that class in my function. I did debugging and realised
what the problem is. DGEList is part of class hierarchy and it inherits from
the
I was surprised to see that sequence lengths weren't set in the
transcriptDb object TxDb.Athaliana.BioMart.plantsmart19 (I
checked TxDb.Athaliana.BioMart.plantsmart21 in devel too, and it had the
same issue). This seems like something that would be set (though maybe
TranscriptDb objects created
Hello,
My package doesn't ever explicitly call LargeDataObject, so I don't think it
should have to explicitly import it.
I am also confused by the advice that Depends is preferable to Imports. I read
in Writing R Extensions that Packages whose namespace only is needed to load
the package
