The fourth quarter Newsletter is now available at
http://www.bioconductor.org/help/newsletters/2014_October/
Topics include support for GRCh38, htslib and an introduction to the
biocMultiAssay working group.
Valerie
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Bioc-devel@r-project.org mai
I'm trying to pileup some BAMs and I'm finding that certain loci in certain
files produce seg faults. I've tried to find some common property, but I'm at a
loss. I've selected a single locus in a single file that reproducibly produces
the problem. The BAM file and its index are on our FTP site.
hi Kasper,
For a concrete example, I posted a R and Rout file here:
https://gist.github.com/mikelove/deaff84dc75f125d
Things to note: 'ranges' is a GRangesList, I cbind() the numeric
vectors in the REDUCE, and then rbind() the final list to get the
desired matrix.
Other than the weird colum
After properly updating all my packages, there is no problem.
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