Re: [Bioc-devel] summarizeOverlaps provide a non existing algorithm argument to findOverlaps

2015-12-26 Thread Nicolas Delhomme
Hej Hervé! This is now working for me and it also builds fine on Bioc. I tend to use biocValid(fix=TRUE) and if I've understood the output correctly, it seems to me that the function will fetch the most recent version available, building it from source if necessary. Cheers, Nico

Re: [Bioc-devel] [Rd] For integer vectors, `as(x, "numeric")` has no effect.

2015-12-26 Thread John Chambers
Re: coerce() methods. Important to realize that as() does not call selectMethod() in the standard way, but restricts inheritance to the first argument: asMethod <- selectMethod("coerce", sig, optional = TRUE, c(from = TRUE, to = FALSE), fdef = coerceFun, A