Hi James,
On 11/14/2016 06:38 PM, James Collins wrote:
I have attempted to remove several .tar.gz files from the LOBSTAHS package
directory using a series of cherry-picked commits. (I had successfully
removed these .tar files a few months ago, but somehow they just reappeared
in the directory af
I have attempted to remove several .tar.gz files from the LOBSTAHS package
directory using a series of cherry-picked commits. (I had successfully
removed these .tar files a few months ago, but somehow they just reappeared
in the directory after I invoked git svn rebase during a recent attempt to
co
Hi Ramon, Diego,
Thanks for bringing this to our attention. This week we'll update R
to 3.3.2 on the machines building release and that will trigger
re-installation of all the packages on these machines. For the devel
builds, the issue will also go away when we update R, which we'll do
in 4 or 5
Hi Diego,
On Mon, 14-11-2016, at 12:25, Diego Diez wrote:
> Hi Ramon,
>
> My experience with this issue is that it requires reinstalling the
> depending packages from source (but not ggplot2 itself).
Makes sense (in my machines, I just reinstalled both, for the sake of
expediency :-) so I shoul
Fixed in ensembldb
thanks Martin!
> On 14 Nov 2016, at 11:37, Martin Morgan wrote:
>
> An interested R-help thread (starting at
> https://stat.ethz.ch/pipermail/r-help/2016-November/443123.html) points out
> that return() is treated as a function by the R parser. This has some
> surprising
Hi Ramon,
My experience with this issue is that it requires reinstalling the
depending packages from source (but not ggplot2 itself).
Alternatively, this should be fixed (I think) once all dependent
packages are rebuilt with the newest ggplot2 installed. See this
related post in the ggtree package
Dear All,
At least some packages (partial list in links below) are failing checks in
both release and devel; the error logs for Linux, Windows, and Mac all show
"Error: processing vignette 'OncoSimulR.Rmd' failed with diagnostics:
[GeomTextRepel/PositionQuasirandom/etc] was built with an incompa
Hi BiocDevel:
I got an error when tried to install several packages from Bioconductor
(rtracklayer, SummarizedExperiments), so I removed BiocInstaller and
reinstall again now error is gone. But, I got warning which previously
happened when I failed to install rtracklayer packages. Because this
war
An interested R-help thread (starting at
https://stat.ethz.ch/pipermail/r-help/2016-November/443123.html) points
out that return() is treated as a function by the R parser. This has
some surprising consequences when it is used without parentheses, for
instance
f0 = function(i)
return (i +
