The human genome is arranged in 46 chromosomes. The longest is ~250 Mb
(~2^28). While a Hilbert curve layout of a single chromosome tends to be
informative, there is no obvious meaning in treating the complete human
genome as a single 3 Gb linear sequence.
Wolfgang
On 10/03/2017 21:54,
On 03/07/2017 08:58 AM, Malgorzata Nowicka wrote:
Hello,
I have the same issue for the DRIMSeq package. The Bioconductor git mirror is
not synchronized with the svn.
Is there a way I could fix that or somebody from the core team has to do that?
I will use the squashing approach for the next
On 03/10/2017 06:47 PM, Zach Skidmore wrote:
Hi All,
I am trying to patch a bug on the release branch for the GenVisR package,
however I can't seem to checkout the release branch:
svn co
https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/GenVisR
svn: E155000:
Hi All,
I am trying to patch a bug on the release branch for the GenVisR package,
however I can't seem to checkout the release branch:
svn co
https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/GenVisR
svn: E155000: '/Users/zskidmor/bioconductor/SVN/GenVisR' is already a
Two replies:
1. Downsampling?
In case you want to use the Hilbert curve for visualisation, please note
that you will need a graphics device with resolution 65536 x 65536 to
display it. Many people have smaller screens, so binning the genome
(e.g. into bins of 10x10=100nt) could be a practical
