Good day,
You could make use of the package named BSgenome.Celegans.UCSC.ce11. It
contains the DNA sequences of all of the chromosomes of the roundworm and
doesn't add any size to your package.
--
Dario Strbenac
University of Sydney
Camperdown NSW 2050
On 03/10/2018 09:03 AM, Pariksheet Nanda wrote:
Hi Claris,
On Sat, Mar 10, 2018 at 2:49 AM, Claris Baby via Bioc-devel <
bioc-devel@r-project.org> wrote:
[1] "The following files are over 5MB in size:
'dataset/Caenorhabditis_elegans.WBcel235.dna.chromosome.I.fa'."
This as well as other
> disk efficient compression algorithm
Whoops, meant to say compression format.
Pariksheet
[[alternative HTML version deleted]]
___
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
Hi Claris,
On Sat, Mar 10, 2018 at 2:49 AM, Claris Baby via Bioc-devel <
bioc-devel@r-project.org> wrote:
>
> [1] "The following files are over 5MB in size:
> 'dataset/Caenorhabditis_elegans.WBcel235.dna.chromosome.I.fa'."
> This as well as other data like .gff files, that are being used
>
