[Bioc-devel] Roxygen documentation under windows

2018-10-07 Thread Christian Mertes
Hey all, I have a question. My package builds perfectly on Linux and MacOS, but fails to link my documentation correctly on Windows, which results in a warning. The exact error which I get is: Rd warning:

Re: [Bioc-devel] avoiding circular dependencies between a Data package and a Software package

2018-10-07 Thread Obenchain, Valerie
I forgot to add the .BBSoptions file should be located at the 'top' level of the package, e.g., MTseekerData/.BBSoptions. You might as well add that now instead of waiting until the packages are approved. I think the SPB was modified to be aware of the .BBSoptions file so it may require it too

Re: [Bioc-devel] avoiding circular dependencies between a Data package and a Software package

2018-10-07 Thread Obenchain, Valerie
Hi Tim, As Michael said, the usual case is the data package 'Suggests' the software and the software 'Depends' or 'Imports' the data but this dependency could be reversed. When submitting a combo of packages to the SPB for review, the package that 'Suggests' is submitted first followed by the