Hi,
I see that SeqVarTools has an error in check on malbec2, after passing
checks for a week with no changes to the code. This is a result of a unit
test which generates random numbers; once in a while a particular set of
random numbers ends up generating a missing value in a calculation which
Hi,
You are not listed on the package as a maintainer, even though the DESCRIPTION
page shows it. Fangxin Hong http://jimmy.harvard.edu>> is listed as maintainer.
I will change the maintainer to you at the email your provided.
I will send your a new BiocCredentials app account details
We apologize for the delay:
The ensembl 96 gtf (converted to GRanges on the fly) and fasta (twobit files)
been added to AnnotationHub and are currently available in Bioc 3.9
> library(AnnotationHub)
> hub = AnnotationHub()
snapshotDate(): 2019-04-29
> length(query(hub, c("ensembl", "gtf",
Hi Sunyoung,
Sorry for the change of motifStack which makes you struggling. Please have a
try following codes for plotting:
pushViewport(viewport(y =unit(.5, "npc") - unit(2, "lines"), height = unit(1,
"npc") - unit(3, "lines")))
pushViewport(viewport(y=.875, height=.25))
On Mon, Apr 29, 2019 at 6:55 AM Pages Gallego, M. <
m.pagesgall...@umcutrecht.nl> wrote:
> Dear all,
>
> I am currently developing a package and I am a bit confused in when one
> should define a generic. Let me propose an example:
> Suppose I have defined 3 classes: one for proteomics data, one
Dear all,
I am currently developing a package and I am a bit confused in when one should
define a generic. Let me propose an example:
Suppose I have defined 3 classes: one for proteomics data, one for metabolomics
data and one for transcriptomics data. I have a function “foo(x)” that will do
Dear Bioconductor team,
I am the maintainer of the RankProd package and I have just realized that
the citation reported in the website is incorrect.
I am trying to activate my Bioconductor Git Credentials in order to make
this change, but it tells me that my email (francescod...@gmail.com) is not
Dear Benjamin,
Thanks for the pointers! I adopted your solution and it now passes the check on
tokay2 as well! Thanks!
All the best
Leif
On 2019-04-26, 15:51, "Benjamin Tremblay" wrote:
Hi,
I’ve actually had the exact same problem. The solution for me was to change
Hi Bioc,
There seems to be a Windows-specific memory allocation error when running
makeGenomicRatioSetFromMatrix() from within DMRcate::DMR.plot() calling the
IlluminaHumanMethylationEPICanno.ilm10b4.hg19 annotation . You can find the
offending error in the most recent build here:
