Re: [Bioc-devel] proposal for additional seqlevelsStyle

2019-12-13 Thread Kasper Daniel Hansen
If the chromosome name depends on the assembly, that makes GenomeInfoDb even more useful and necessary. Provided it is supported of course. On Fri, Dec 13, 2019 at 11:45 AM Vincent Carey wrote: > I tried an inline png but I think it was rejected by bioc-devel. Here's > another try. > > On

Re: [Bioc-devel] proposal for additional seqlevelsStyle

2019-12-13 Thread Vincent Carey
I tried an inline png but I think it was rejected by bioc-devel. Here's another try. On Fri, Dec 13, 2019 at 11:40 AM Vincent Carey wrote: > Thanks -- It is good to know more about the complications of adding > seqlevelsStyle elements. > I am not sure how pervasive this will be in SNP

Re: [Bioc-devel] proposal for additional seqlevelsStyle

2019-12-13 Thread Robert Castelo
hi Hervé, i didn't know about this new sequence style until Vince posted his message and we briefly talked about it at the European BioC meeting this week in Brussels. however, i didn't know that the style was specific to a particular assembly. i have no use case of this at the mome moment,