Re: [Bioc-devel] Problem in activating the Account for Bioconductor Git Credentials

Hi Nitesh, thank you very much! the email pa...@idsia.ch was the one with which I created the package 10 years ago, but lot of years ago I changed it in all documents of the package with the current one since I changed Institution. I was able to add my SSH key and to

Re: [Bioc-devel] TIMEOUT error in building vignette in package scruff

I can confirm that downgrading Rsubread to an older version eliminates the slowdown. Here are the timings I get on my laptop (Ubuntu 16.04.6 LTS) for 'R CMD build scruff' with different versions of Rsubread (all these timings use the same R-devel version and the latest master branch of

Re: [Bioc-devel] TIMEOUT error in building vignette in package scruff

Hi Zhe, The code in the vignette seems to rely a lot on the Rsubread package to perform some very computationally intensive operations. Could it be that some recent changes to the Rsubread package are somehow related to the sudden slowdown of these operations? That's something I suggest you

Re: [Bioc-devel] Warning: 'rgl_init' failed

Hi Fernando, This is a warning only and is on our side (i.e. it's an issue with how our Mac builders are set up). It can safely be ignored. Cheers, H. On 1/7/20 23:58, Fernando Pérez Sanz wrote: > Dear Bioc-devel > > I have obtained the following warning by building binaries in celaya2 OS >

[Bioc-devel] TIMEOUT error in building vignette in package scruff

Hi all, I am the maintainer of package scruff. Recently I encountered a timeout error in creating vignette in the development branch of the package. I tried increasing the number of cores for parallelization from 2 to 3 but it still timed out. I did not make any changes to the R codes in the

Re: [Bioc-devel] Updating for 3.11

I agree with Martin that the R administration guide should be frequently consulted on Mac OS and other systems (and would have save me a couple hours of trouble shooting the other week). However it's not always updated for the most recent Mac OS perversions, as I found:

Re: [Bioc-devel] Problem in activating the Account for Bioconductor Git Credentials

Hi Paola, It seems your email is registered to pa...@idsia.ch on the Bioconductor Git repository. I've changed it on my end. You should be able to activate your account https://git.bioconductor.org/BiocCredentials/account_activation/ with the new email address. Once

[Bioc-devel] Problem in activating the Account for Bioconductor Git Credentials

Dear All, I am the author and Maintainer of the package mBPCR. I was adviced to fix some issues in the package. Thus, I am trying to create a new GitHub repository for my package and I need to activate my account for Bioconductor Git Credentials. But, the website told me that: